| 9/2/2016 | Northwestern State (1-10) | 7 | at | Baylor | 55 | SLC (1AA) | ||
| 9/10/2016 | SMU (5-7) | 13 | at | Baylor | 40 | AAC | ||
| 9/16/2016 | Baylor | 38 | at | Rice (3-9) | 10 | at CUSA | ||
| 9/24/2016 | Oklahoma State (10-3,7-2) | 24 | at | Baylor | 35 | |||
| 10/1/2016 | Baylor | 45 | at | Iowa State (3-9,2-7) | 42 | |||
| 10/15/2016 | Kansas (2-10,1-8) | 7 | at | Baylor | 49 | |||
| 10/29/2016 | Baylor | 34 | at | Texas (5-7,3-6) | 35 | |||
| 11/5/2016 | TCU (6-7,4-5) | 62 | at | Baylor | 22 | |||
| 11/12/2016 | Baylor | 24 | at | Oklahoma (11-2,9-0) | 45 | |||
| 11/19/2016 | Kansas State (9-4,6-3) | 42 | at | Baylor | 21 | |||
| 11/25/2016 | Baylor | 35 | vs | Texas Tech (5-7,3-6) | 54 | Arlington TX | ||
| 12/3/2016 | Baylor | 21 | at | West Virginia (10-3,7-2) | 24 | |||
| 12/27/2016 | Boise State (10-3) | 12 | vs | Baylor | 31 | Cactus Bowl (Phoenix AZ) | MW |
| vs Baylor | vs Other Opponents | Baylor compared to OOs | |
| Record: | 6-7 | 74-74 | |
| Points Scored: | 29.00 | 31.95 | 2.95 |
| Points Allowed: | 34.62 | 30.51 | 4.11 |
| Margin: | -5.62 | 1.44 | 7.06 |
| Total Points: | 63.62 | 62.46 | 1.16 |