| 9/1/2016 | Coast Guard | 34 | at | Anna Maria | 0 | NEF | ||
| 9/2/2016 | Fitchburg State | 27 | at | Becker | 20 | MSCAC | ||
| UMass Dartmouth | 40 | at | Mount Ida | 9 | MSCAC | |||
| 9/3/2016 | Husson | 28 | at | Alfred | 35 | @ E8 | ||
| Plymouth State | 20 | at | Castleton State | 7 | MSCAC | |||
| Shenandoah | 43 | at | Gallaudet | 6 | ODC | |||
| SUNY-Maritime | 35 | at | Maine Maritime | 28 | OT | @ NEF | ||
| Rensselaer | 31 | at | Norwich | 17 | LL | |||
| 9/9/2016 | Anna Maria | 7 | at | Nichols | 22 | @ NEF | ||
| Massachusetts Maritime | 28 | at | SUNY-Maritime | 24 | MSCAC | |||
| 9/10/2016 | Castleton State | 3 | at | Fitchburg State | 34 | @ MSCAC | ||
| Earlham | 0 | at | Gallaudet | 30 | HCA | |||
| Becker | 17 | at | MIT | 10 | @ NEF | |||
| Mount Ida | 28 | at | Plymouth State | 30 | 3OT | @ MSCAC | ||
| Norwich | 0 | at | St Lawrence | 52 | @ LL | |||
| 9/16/2016 | Merchant Marine | 16 | at | SUNY-Maritime | 20 | LL | ||
| 9/17/2016 | Nichols | 16 | at | Becker | 13 | NEF | ||
| Salve Regina | 49 | at | Castleton State | 19 | NEF | |||
| Anna Maria | 3 | at | Curry | 42 | @ NEF | |||
| Gallaudet | 6 | at | Greensboro | 21 | @ USASC | |||
| Worcester Polytechnic | 40 | at | Norwich | 17 | LL | |||
| Mount Ida | 0 | at | Springfield | 32 | @ LL | |||
| 9/24/2016 | Alfred State | 0 | at | Husson | 35 | D3Ind | ||
| 10/1/2016 | Anna Maria | 13 | at | Castleton State | 23 | |||
| Becker | 42 | at | Gallaudet | 18 | ||||
| Mount Ida | 15 | at | Norwich | 14 | ||||
| Husson | 33 | at | SUNY-Maritime | 12 | ||||
| 10/8/2016 | SUNY-Maritime | 22 | at | Anna Maria | 0 | |||
| Norwich | 22 | at | Becker | 13 | ||||
| Gallaudet | 16 | at | Husson | 50 | ||||
| Castleton State | 26 | at | Mount Ida | 14 | ||||
| 10/15/2016 | Norwich | 28 | at | Anna Maria | 7 | |||
| Husson | 43 | at | Castleton State | 21 | ||||
| Mount Ida | 13 | at | Gallaudet | 12 | ||||
| Becker | 13 | at | SUNY-Maritime | 40 | ||||
| 10/22/2016 | SUNY-Maritime | 31 | at | Castleton State | 32 | |||
| Anna Maria | 0 | at | Husson | 42 | ||||
| Becker | 19 | at | Mount Ida | 23 | ||||
| Gallaudet | 6 | at | Norwich | 27 | ||||
| 10/29/2016 | Mount Ida | 55 | at | Anna Maria | 21 | |||
| Husson | 45 | at | Becker | 14 | ||||
| Castleton State | 17 | at | Gallaudet | 21 | ||||
| Norwich | 17 | at | SUNY-Maritime | 14 | OT | |||
| 11/5/2016 | Gallaudet | 13 | at | Anna Maria | 27 | |||
| Castleton State | 23 | at | Becker | 22 | ||||
| Norwich | 13 | at | Husson | 27 | ||||
| SUNY-Maritime | 17 | at | Mount Ida | 14 | ||||
| 11/12/2016 | Anna Maria | 7 | at | Becker | 31 | |||
| SUNY-Maritime | 31 | at | Gallaudet | 28 | ||||
| Husson | 54 | at | Mount Ida | 20 | ||||
| Castleton State | 27 | at | Norwich | 35 | ||||
| 11/19/2016 | Husson | 27 | at | Western New England | 44 | @ NEF | ||
| 11/20/2016 | Rensselaer | 38 | vs | SUNY-Maritime | 6 | Philadelphia PA | vs LL |