| 9/1/2016 | Central Oklahoma (3-8,3-8) | 26 | at | Lindenwood | 49 | | | |
| 9/8/2016 | Lindenwood | 31 | at | Northeastern State (2-9,2-9) | 35 | | | |
| 9/17/2016 | Lindenwood | 29 | at | Washburn (7-5,7-4) | 34 | | | |
| 9/24/2016 | Pittsburg State (7-4,7-4) | 50 | at | Lindenwood | 19 | | | |
| 10/1/2016 | Lindenwood | 6 | at | Fort Hays State (8-4,7-4) | 37 | | | |
| 10/8/2016 | Missouri Western (4-7,4-7) | 37 | at | Lindenwood | 29 | | | |
| 10/15/2016 | Lindenwood | 28 | at | Emporia State (11-2,10-2) | 35 | | | |
| 10/22/2016 | Northwest Missouri State (15-0,12-0) | 47 | at | Lindenwood | 12 | | | |
| 10/29/2016 | Lindenwood | 35 | at | Nebraska-Kearney (1-10,1-10) | 14 | | | |
| 11/5/2016 | Missouri Southern (2-9,2-9) | 28 | at | Lindenwood | 42 | | | |
| 11/12/2016 | Lindenwood | 7 | at | Central Missouri (9-3,9-2) | 35 | | | |