| 9/1/2016 | Missouri Southern (2-9,2-9) | 10 | at | Fort Hays State | 22 | | | |
| 9/8/2016 | Fort Hays State | 17 | at | Central Missouri (9-3,9-2) | 34 | | | |
| 9/17/2016 | Central Oklahoma (3-8,3-8) | 20 | at | Fort Hays State | 34 | | | |
| 9/24/2016 | Fort Hays State | 34 | at | Northeastern State (2-9,2-9) | 7 | | | |
| 10/1/2016 | Lindenwood (3-8,3-8) | 6 | at | Fort Hays State | 37 | | | |
| 10/8/2016 | Fort Hays State | 54 | at | Pittsburg State (7-4,7-4) | 41 | | | |
| 10/15/2016 | Fort Hays State | 24 | at | Washburn (7-5,7-4) | 30 | | | |
| 10/22/2016 | Missouri Western (4-7,4-7) | 27 | at | Fort Hays State | 35 | | | |
| 10/29/2016 | Fort Hays State | 16 | at | Emporia State (11-2,10-2) | 24 | | | |
| 11/5/2016 | Northwest Missouri State (15-0,12-0) | 28 | at | Fort Hays State | 7 | | | |
| 11/12/2016 | Fort Hays State | 27 | at | Nebraska-Kearney (1-10,1-10) | 17 | | | |
| 12/3/2016 | Eastern New Mexico (7-5) | 12 | at | Fort Hays State | 45 | | ? | LSC |