| 9/4/2016 | Alcorn State (5-6) | at | Bethune-Cookman | Cancelled | SWAC | |||
| 9/10/2016 | Bethune-Cookman | 20 | at | North Texas (5-8) | 41 | at CUSA | ||
| 9/17/2016 | Tennessee State (7-4) | 31 | at | Bethune-Cookman | 24 | OVC | ||
| 9/24/2016 | Bethune-Cookman | 10 | at | Savannah State (3-7,3-5) | 16 | OT | ||
| 10/1/2016 | North Carolina Central (9-3,8-0) | 31 | at | Bethune-Cookman | 14 | |||
| 10/15/2016 | North Carolina A&T (9-3,7-1) | 52 | at | Bethune-Cookman | 35 | |||
| 10/22/2016 | Bethune-Cookman | 21 | at | Norfolk State (4-7,3-5) | 14 | |||
| 10/29/2016 | Delaware State (0-11,0-8) | 10 | at | Bethune-Cookman | 41 | |||
| 11/5/2016 | Bethune-Cookman | 41 | at | Morgan State (3-8,3-5) | 10 | |||
| 11/19/2016 | Florida A&M (4-7,4-4) | 19 | vs | Bethune-Cookman | 39 | Orlando FL | ||
| 11/26/2016 | Bethune-Cookman | 7 | at | South Carolina State (5-6,5-3) | 28 |
| vs Bethune-Cookman | vs Other Opponents | Bethune-Cookman compared to OOs | |
| Record: | 6-4 | 48-66 | |
| Points Scored: | 25.20 | 23.05 | -2.15 |
| Points Allowed: | 25.20 | 29.59 | -4.39 |
| Margin: | 0.00 | -6.54 | -6.54 |
| Total Points: | 50.40 | 52.64 | -2.24 |