| 5-5 | — | 0 | (2 Common Ops) | 0 | Appalachian State | 8-4 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 9/8/2012 | W 35-27 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (7-4) | 9/29/2012 | W 55-14 |
| 0-2 | 11-9 | 2-0 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Army | 2-10 |
| L 17-20 at | 9/1/2012 | Wake Forest (3-7) | 9/22/2012 | L 37-49 at |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 9/29/2012 | L 3-23 |
| 1-1 | 11-9 | 0-2 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Bethune-Cookman | 9-3 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 10/20/2012 | W 48-3 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 11/24/2012 | L 14-24 |
| 0-2 | 8-11 | 1-1 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Boston College | 2-10 |
| L 17-20 at | 9/1/2012 | Wake Forest (3-7) | 11/3/2012 | L 14-28 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Bucknell | 3-8 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 10/20/2012 | L 19-42 at |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Central Conn | 2-8 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 9/1/2012 | L 17-49 at |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 9/8/2012 | L 14-35 |
| 1-1 | 16-3 | 0-2 |
|
| 4-5 | — | 1 | (5 Common Ops) | 0 | Charleston Southern | 3-5 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 10/6/2012 | L 7-49 at |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 10/13/2012 | W 32-14 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 10/20/2012 | W 31-21 |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 11/10/2012 | W 28-10 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 11/17/2012 | L 20-41 at |
| 4-1 | 18-27 | 3-2 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Clemson | 11-2 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 10/25/2012 | W 42-13 at |
|
| 5-4 | — | 0 | (5 Common Ops) | 1 | Coastal Carolina | 7-5 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 10/13/2012 | L 21-27 |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 10/20/2012 | W 34-7 at |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 11/3/2012 | W 56-33 at |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 11/10/2012 | W 65-7 at |
| W 26-12 | 11/3/2012 | Charleston Southern (3-4) | 11/17/2012 | W 41-20 |
| 5-0 | 15-26 | 4-1 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Colgate | 8-4 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 9/22/2012 | L 31-32 at |
| L 26-28 | 9/22/2012 | Lehigh (9-0) | 11/10/2012 | W 35-24 at |
| 1-1 | 17-2 | 1-1 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Columbia | 3-7 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 10/6/2012 | L 14-35 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Davidson | 2-8 |
| W 56-7 at | 10/13/2012 | Presbyterian (0-8) | 9/29/2012 | L 13-28 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Delaware State | 6-5 |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 9/1/2012 | W 17-10 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 10/6/2012 | W 20-17 at |
| 1-1 | 3-13 | 2-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Duke | 6-7 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 9/29/2012 | W 34-27 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Eastern Kentucky | 8-3 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (7-4) | 9/15/2012 | W 35-17 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Eastern Washington | 11-3 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 9/29/2012 | W 32-26 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Florida State | 12-2 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 9/15/2012 | W 52-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Fordham | 5-5 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 9/29/2012 | L 31-34 at |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Furman | 3-8 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 9/8/2012 | L 45-47 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 9/22/2012 | W 31-21 at |
| 1-1 | 7-12 | 1-1 |
|
| 4-5 | — | 1 | (5 Common Ops) | 0 | Gardner-Webb | 2-7 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 10/20/2012 | L 10-41 at |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 10/27/2012 | W 38-7 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 11/3/2012 | L 33-56 |
| W 26-12 | 11/3/2012 | Charleston Southern (2-5) | 11/10/2012 | L 10-28 at |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 11/17/2012 | W 21-15 |
| 4-1 | 18-26 | 2-3 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Georgetown | 5-6 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 10/13/2012 | L 14-17 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Georgia Tech | 7-7 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 9/8/2012 | W 59-3 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Hampton | 3-7 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 10/13/2012 | W 28-14 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Holy Cross | 2-9 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 11/3/2012 | L 35-36 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Howard | 5-5 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 9/15/2012 | W 37-36 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Idaho State | 0-10 |
| L 14-34 at | 9/15/2012 | Montana (3-6) | 10/27/2012 | L 24-70 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Illinois | 2-10 |
| W 26-12 | 11/3/2012 | Charleston Southern (3-4) | 9/15/2012 | W 44-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Jacksonville | 6-4 |
| W 26-12 | 11/3/2012 | Charleston Southern (3-4) | 9/8/2012 | W 31-10 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Lafayette | 5-6 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 11/17/2012 | L 21-38 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Maryland | 4-8 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 10/6/2012 | W 19-14 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Monmouth NJ | 5-5 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 9/1/2012 | L 17-27 at |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Montana State | 10-2 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 11/17/2012 | W 16-7 at |
| W 28-14 | 11/10/2012 | Stony Brook (9-1) | 12/1/2012 | W 16-10 |
| 1-1 | 13-6 | 2-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Morgan State | 4-7 |
| L 24-31 | 9/8/2012 | Norfolk State (1-7) | 11/10/2012 | L 0-30 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Navy | 8-5 |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 9/22/2012 | W 41-3 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | North Carolina | 8-4 |
| L 17-20 at | 9/1/2012 | Wake Forest (3-7) | 9/8/2012 | L 27-28 at |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | North Carolina A&T | 5-4 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 9/1/2012 | L 13-29 at |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 10/27/2012 | W 30-9 |
| 0-2 | 8-11 | 1-1 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | North Carolina State | 7-6 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 11/10/2012 | W 37-6 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | North Dakota | 4-6 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 10/20/2012 | W 40-34 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Northern Arizona | 7-3 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 9/22/2012 | W 41-31 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Northern Colorado | 4-6 |
| L 14-34 at | 9/15/2012 | Montana (3-6) | 10/6/2012 | L 17-40 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Notre Dame | 12-1 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 11/17/2012 | W 38-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Ohio | 9-4 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 9/22/2012 | W 44-10 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Old Dominion | 10-3 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (7-4) | 12/1/2012 | W 63-35 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Pittsburgh | 6-7 |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 9/22/2012 | W 55-10 |
|
| 4-5 | — | 1 | (5 Common Ops) | 0 | Presbyterian | 1-8 |
| W 42-35 | 10/6/2012 | Gardner-Webb (1-7) | 11/17/2012 | L 15-21 at |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 11/10/2012 | L 7-65 |
| W 26-12 | 11/3/2012 | Charleston Southern (2-5) | 10/20/2012 | L 21-31 at |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 10/27/2012 | L 17-56 |
| W 33-14 at | 11/17/2012 | VMI (0-8) | 10/6/2012 | L 7-17 at |
| 4-1 | 17-27 | 0-5 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Princeton | 5-5 |
| L 26-28 | 9/22/2012 | Lehigh (8-1) | 9/15/2012 | L 14-17 at |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Richmond | 8-3 |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 9/8/2012 | W 41-8 |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 9/15/2012 | W 47-6 at |
| 2-0 | 3-13 | 2-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Samford | 6-4 |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 9/15/2012 | W 44-23 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Savannah State | 0-10 |
| L 24-31 | 9/8/2012 | Norfolk State (1-7) | 11/3/2012 | L 21-33 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | South Carolina State | 5-6 |
| L 24-31 | 9/8/2012 | Norfolk State (2-6) | 9/29/2012 | W 14-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | South Dakota | 1-10 |
| L 14-34 at | 9/15/2012 | Montana (3-6) | 9/1/2012 | L 24-35 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Southern Utah | 4-6 |
| L 14-34 at | 9/15/2012 | Montana (4-5) | 10/13/2012 | W 30-20 at |
|
| 4-5 | — | 1 | (5 Common Ops) | 0 | Stony Brook | 9-2 |
| W 26-12 | 11/3/2012 | Charleston Southern (3-4) | 10/6/2012 | W 49-7 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (7-4) | 10/13/2012 | W 27-21 at |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 10/20/2012 | W 41-10 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 10/27/2012 | W 56-17 at |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 11/3/2012 | W 45-7 |
| 4-1 | 14-28 | 5-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Syracuse | 8-5 |
| W 28-14 | 11/10/2012 | Stony Brook (9-1) | 9/15/2012 | W 28-17 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | The Citadel | 7-4 |
| W 26-12 | 11/3/2012 | Charleston Southern (3-4) | 9/1/2012 | W 49-14 |
| W 33-14 at | 11/17/2012 | VMI (1-7) | 11/10/2012 | W 27-24 at |
| 2-0 | 4-11 | 2-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Toledo | 9-4 |
| L 12-36 at | 10/27/2012 | Coastal Carolina (7-4) | 9/22/2012 | W 38-28 |
|
| 5-5 | — | 0 | (2 Common Ops) | 0 | Vanderbilt | 9-4 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 9/15/2012 | W 58-0 |
| L 17-20 at | 9/1/2012 | Wake Forest (4-6) | 11/24/2012 | W 55-21 at |
| 1-1 | 5-13 | 2-0 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Villanova | 8-4 |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 11/24/2012 | L 10-20 at |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Virginia | 4-8 |
| L 17-20 at | 9/1/2012 | Wake Forest (3-7) | 10/20/2012 | L 10-16 |
|
| 4-5 | — | 1 | (5 Common Ops) | 0 | VMI | 1-8 |
| W 56-7 at | 10/13/2012 | Presbyterian (1-7) | 10/6/2012 | W 17-7 |
| W 26-12 | 11/3/2012 | Charleston Southern (2-5) | 10/13/2012 | L 14-32 at |
| L 12-36 at | 10/27/2012 | Coastal Carolina (6-5) | 10/20/2012 | L 7-34 |
| W 42-35 | 10/6/2012 | Gardner-Webb (1-7) | 10/27/2012 | L 7-38 at |
| W 28-14 | 11/10/2012 | Stony Brook (8-2) | 11/3/2012 | L 7-45 at |
| 4-1 | 18-26 | 1-4 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Weber State | 2-9 |
| L 14-34 at | 9/15/2012 | Montana (3-6) | 11/3/2012 | L 21-24 |
|
| 5-5 | — | 0 | (1 Common Ops) | 0 | Wofford | 8-4 |
| W 42-35 | 10/6/2012 | Gardner-Webb (2-6) | 9/1/2012 | W 34-7 at |
|