| 9/3/2016 | Cortland | 30 | at | Heidelberg (6-4) | 28 | at OAC | ||
| 9/10/2016 | Framingham State (8-3) | 21 | at | Cortland | 49 | MSCAC | ||
| 9/17/2016 | St John Fisher (8-3,6-2) | 31 | at | Cortland | 24 | |||
| 9/24/2016 | Cortland | 13 | at | Utica (7-4,5-3) | 24 | |||
| 10/1/2016 | Cortland | 50 | at | Hartwick (2-8,1-7) | 47 | |||
| 10/8/2016 | Buffalo State (5-5,3-5) | 39 | at | Cortland | 21 | |||
| 10/15/2016 | Cortland | 28 | at | Alfred (13-1,8-0) | 41 | |||
| 10/22/2016 | Cortland | 19 | at | Brockport State (7-4,6-2) | 21 | |||
| 10/29/2016 | Morrisville (1-9,0-8) | 20 | at | Cortland | 45 | |||
| 11/12/2016 | Ithaca (5-5,4-4) | 16 | at | Cortland | 28 | |||
| 11/18/2016 | Cortland | 27 | vs | Kean (7-4) | 30 | Philadelphia PA | vs NJAC |
| vs Cortland | vs Other Opponents | Cortland compared to OOs | |
| Record: | 6-5 | 63-45 | |
| Points Scored: | 28.91 | 30.13 | 1.22 |
| Points Allowed: | 30.36 | 27.11 | 3.25 |
| Margin: | -1.45 | 3.02 | 4.47 |
| Total Points: | 59.27 | 57.24 | 2.03 |