| Thursday, 30 Nov 2006 | |||||||
| MAC | Ohio | 10 | vs | Central Michigan | 31 | MAC Championship (Detroit MI) | |
| Friday, 1 Dec 2006 | |||||||
| CUSA | Southern Miss | 20 | @ | Houston | 34 | CUSA Championship | |
| Saturday, 2 Dec 2006 | |||||||
| Montana St | 17 | @ | Appalachian St | 38 | 1-AA Playoffs | ||
| P10 | Stanford | 17 | @ | #19 California | 26 | ||
| Fort Lewis (D2) | 24 | @ | Dixie St (D2) | 14 | |||
| SEC | #12 Arkansas | 28 | vs | #2 Florida | 38 | SEC Championship (Atlanta GA) | |
| SBC | Troy | 26 | @ | Florida Int'l | 13 | ||
| ACC | #14 Wake Forest | 9 | vs | #25 Georgia Tech | 6 | ACC Championship (Jacksonville FL) | |
| SWAC | Alcorn St | 21 | @ | Grambling St | 14 | ||
| North Dakota (D2) | 20 | @ | Grand Valley St (D2) | 30 | D-II Playoffs | ||
| #24 Oregon St | 35 | @ | Hawaii | 32 | |||
| Tuskegee (D2) | 17 | @ | Johnson C. Smith (D2) | 7 | |||
| SBC | Louisiana-Monroe | 39 | @ | Louisiana-Lafayette | 20 | ||
| BigE | Connecticut | 17 | @ | #5 Louisville | 48 | ||
| A10 | New Hampshire | 17 | @ | Massachusetts | 24 | 1-AA Playoffs | |
| San Diego | 27 | @ | Monmouth NJ | 7 | |||
| Southern Illinois | 3 | @ | Montana | 20 | 1-AA Playoffs | ||
| OAC | Capital (D3) | 14 | @ | Mount Union (D3) | 17 | D-III Playoffs | |
| Ind | Army | 14 | vs | Navy | 26 | Philadelphia PA | |
| WAC | Louisiana Tech | 23 | @ | New Mexico St | 50 | ||
| GSC | Delta St (D2) | 27 | @ | North Alabama (D2) | 10 | D-II Playoffs | |
| Chadron St (D2) | 21 | @ | NW Missouri St (D2) | 28 | D-II Playoffs | ||
| B12 | #22 Nebraska | 7 | @ | #7 Oklahoma | 21 | Big 12 Championship (Kansas City) | |
| Bemidji St (D2) | 27 | vs | Pittsburg St (D2) | 35 | Excelsior Springs MO | ||
| MW | Colorado St | 6 | @ | San Diego St | 17 | ||
| WAC | Fresno St | 14 | @ | San Jose St | 24 | ||
| Bloomsburg (D2) | 24 | @ | Shepherd (D2) | 21 | D-II Playoffs | ||
| Missouri Valley (NAIA) | 18 | @ | Sioux Falls (NAIA) | 25 | |||
| MSFA | St Xavier (NAIA) | 20 | @ | St Francis IN (NAIA) | 49 | ||
| Rowan (D3) | 0 | @ | St John Fisher (D3) | 31 | D-III Playoffs | ||
| MW | Air Force | 14 | @ | #24 TCU | 38 | ||
| P10 | #7 Southern Cal | 9 | @ | UCLA | 13 | ||
| St John's MN (D3) | 14 | @ | UW-Whitewater (D3) | 17 | D-III Playoffs | ||
| Mary Hardin-Baylor (D3) | 20 | @ | Wesley (D3) | 34 | D-III Playoffs | ||
| BigE | #16 Rutgers | 39 | @ | #12 West Virginia | 41 | 3OT | |
| GW | Illinois St | 21 | @ | Youngstown St | 28 | 1-AA Playoffs | |