| 9/2/2006 | Prairie View | 14 | vs | Texas Southern | 17 | SWAC | Houston TX | ||
| 9/9/2006 | Texas Southern | 10 | @ | Alabama St | 9 | SWAC | |||
| 9/16/2006 | Texas Southern | 14 | @ | New Mexico St | 48 | ||||
| 9/23/2006 | Alabama A&M | 19 | @ | Texas Southern | 14 | SWAC | |||
| 9/30/2006 | Jackson St | 29 | @ | Texas Southern | 5 | SWAC | |||
| 10/14/2006 | Texas Southern | 23 | @ | Alcorn St | 45 | SWAC | |||
| 10/21/2006 | MS Valley St | 20 | @ | Texas Southern | 18 | SWAC | |||
| 10/28/2006 | Grambling | 28 | @ | Texas Southern | 33 | SWAC | |||
| 11/4/2006 | Texas Southern | 17 | @ | Southern Univ | 34 | SWAC | |||
| 11/11/2006 | Texas Southern | 21 | @ | Texas St | 41 | ||||
| 11/18/2006 | Texas Southern | 31 | @ | Ark Pine Bluff | 42 | SWAC |