| 9/2/2006 | Murray St | 7 | @ | Missouri | 47 | ||||
| 9/9/2006 | Mississippi | 7 | @ | Missouri | 34 | ||||
| 9/16/2006 | Missouri | 27 | @ | New Mexico | 17 | ||||
| 9/23/2006 | Ohio | 6 | @ | Missouri | 31 | ||||
| 9/30/2006 | Colorado | 13 | @ | Missouri | 28 | B12 | |||
| 10/7/2006 | Missouri | 38 | @ | Texas Tech | 21 | B12 | |||
| 10/14/2006 | Missouri | 19 | @ | #21 Texas A&M | 25 | B12 | |||
| 10/21/2006 | Kansas St | 21 | @ | Missouri | 41 | B12 | |||
| 10/28/2006 | #7 Oklahoma | 26 | @ | Missouri | 10 | B12 | |||
| 11/4/2006 | Missouri | 20 | @ | #22 Nebraska | 34 | B12 | |||
| 11/18/2006 | Missouri | 16 | @ | Iowa State | 21 | B12 | |||
| 11/25/2006 | Kansas | 17 | @ | Missouri | 42 | B12 | |||
| 12/29/2006 | #24 Oregon St | 39 | vs | Missouri | 38 | Sun |