| 9/7/2013 | Buffalo State (5-5) | 41 | at | Cortland | 28 | E8 | ||
| 9/21/2013 | William Paterson (3-7,1-6) | 15 | at | Cortland | 26 | |||
| 9/28/2013 | Cortland | 25 | at | St John Fisher (10-3) | 33 | at E8 | ||
| 10/5/2013 | Kean (2-8,1-6) | 7 | at | Cortland | 17 | |||
| 10/12/2013 | Cortland | 48 | at | Montclair State (4-6,3-4) | 14 | |||
| 10/19/2013 | Cortland | 32 | at | Brockport State (8-3,6-1) | 49 | |||
| 10/26/2013 | New Jersey (5-5,4-3) | 7 | at | Cortland | 20 | |||
| 11/2/2013 | Cortland | 9 | at | Rowan (9-3,6-1) | 10 | |||
| 11/9/2013 | Morrisville (3-7,2-5) | 49 | at | Cortland | 62 | |||
| 11/16/2013 | Cortland | 28 | at | Ithaca (9-3) | 24 | at E8 | ||
| 11/23/2013 | Cortland | 14 | at | Alfred (8-3) | 21 | ECAC North Central Bowl | at E8 |
| vs Cortland | vs Other Opponents | Cortland compared to OOs | |
| Record: | 5-6 | 61-47 | |
| Points Scored: | 24.55 | 24.38 | -0.17 |
| Points Allowed: | 28.09 | 23.00 | 5.09 |
| Margin: | -3.54 | 1.38 | 4.92 |
| Total Points: | 52.64 | 47.38 | 5.26 |