| 9/7/2013 | Apprentice (0-9) | 6 | at | Muhlenberg | 59 | D3IND | ||
| 9/14/2013 | Muhlenberg | 21 | at | Franklin & Marshall (7-4,6-3) | 28 | |||
| 9/21/2013 | McDaniel (2-8,2-7) | 0 | at | Muhlenberg | 58 | |||
| 9/28/2013 | Muhlenberg | 13 | at | Johns Hopkins (10-1,9-0) | 45 | |||
| 10/5/2013 | Susquehanna (1-9,1-8) | 18 | at | Muhlenberg | 38 | |||
| 10/19/2013 | Muhlenberg | 35 | at | Gettysburg (4-6,3-6) | 10 | |||
| 10/26/2013 | Muhlenberg | 27 | at | Juniata (7-4,6-3) | 7 | |||
| 11/2/2013 | Dickinson (3-7,3-6) | 3 | at | Muhlenberg | 42 | |||
| 11/9/2013 | Muhlenberg | 41 | at | Ursinus (7-3,6-3) | 10 | |||
| 11/16/2013 | Moravian (2-8,2-7) | 12 | at | Muhlenberg | 24 | |||
| 11/23/2013 | Salisbury (7-4) | 21 | at | Muhlenberg | 19 | ECAC Bowl | E8 |
| vs Muhlenberg | vs Other Opponents | Muhlenberg compared to OOs | |
| Record: | 3-8 | 47-55 | |
| Points Scored: | 14.55 | 27.44 | 12.89 |
| Points Allowed: | 34.27 | 27.95 | 6.32 |
| Margin: | -19.72 | -0.51 | 19.21 |
| Total Points: | 48.82 | 55.39 | -6.57 |