| 8/31/2013 | UC Davis (5-7) | 7 | at | South Dakota | 10 | BSKY | ||
| 9/7/2013 | South Dakota | 14 | at | Kansas (3-9) | 31 | at B12 | ||
| 9/21/2013 | South Dakota | 16 | at | Northern Arizona (9-3) | 22 | at BSKY | ||
| 9/28/2013 | South Dakota | 10 | at | Western Illinois (4-8,2-6) | 24 | |||
| 10/5/2013 | Missouri State (5-7,5-3) | 14 | at | South Dakota | 17 | |||
| 10/12/2013 | Indiana State (1-11,0-8) | 14 | at | South Dakota | 17 | |||
| 10/19/2013 | South Dakota | 38 | at | Northern Iowa (7-5,3-5) | 31 | 2OT | ||
| 10/26/2013 | South Dakota | 14 | at | Illinois State (5-6,4-4) | 28 | |||
| 11/2/2013 | Youngstown State (8-4,5-3) | 38 | at | South Dakota | 34 | |||
| 11/9/2013 | Montana (10-3) | 31 | at | South Dakota | 27 | BSKY | ||
| 11/16/2013 | South Dakota State (9-5,5-3) | 27 | at | South Dakota | 12 | |||
| 11/23/2013 | South Dakota | 0 | at | North Dakota State (15-0,8-0) | 42 |
| vs South Dakota | vs Other Opponents | South Dakota compared to OOs | |
| Record: | 8-4 | 73-64 | |
| Points Scored: | 25.75 | 26.87 | 1.12 |
| Points Allowed: | 17.42 | 24.72 | -7.30 |
| Margin: | 8.33 | 2.15 | -6.18 |
| Total Points: | 43.17 | 51.59 | -8.42 |