| 9/1/2012 | Missouri Valley | 27 | at | McPherson (5-4) | 13 | at KCAC | ||
| 9/8/2012 | Missouri Valley | 41 | at | MidAmerica Nazarene (8-3,8-1) | 7 | |||
| 9/15/2012 | Avila (2-9,1-8) | 6 | at | Missouri Valley | 55 | |||
| 9/22/2012 | Missouri Valley | 31 | at | Baker (8-3,7-2) | 17 | |||
| 9/29/2012 | Culver-Stockton (1-10,0-9) | 7 | at | Missouri Valley | 47 | |||
| 10/13/2012 | Benedictine KS (7-4,5-4) | 26 | at | Missouri Valley | 42 | |||
| 10/20/2012 | Missouri Valley | 39 | at | Graceland (5-6,4-5) | 7 | |||
| 10/27/2012 | Peru State (5-6,3-6) | 13 | at | Missouri Valley | 67 | |||
| 11/3/2012 | Missouri Valley | 35 | at | Evangel (7-4,6-3) | 21 | |||
| 11/10/2012 | Central Methodist (2-8,2-7) | 6 | at | Missouri Valley | 25 | |||
| 11/17/2012 | Ottawa (8-3) | 21 | at | Missouri Valley | 26 | NAIA playoffs | KCAC | |
| 11/24/2012 | Bethel TN (9-4) | 7 | at | Missouri Valley | 10 | NAIA Quarterfinals | MSC | |
| 12/1/2012 | Marian IN (12-1) | 20 | at | Missouri Valley | 17 | NAIA Semifinals | MSFA |
| vs Missouri Valley | vs Other Opponents | Missouri Valley compared to OOs | |
| Record: | 1-12 | 78-53 | |
| Points Scored: | 13.15 | 29.73 | 16.58 |
| Points Allowed: | 35.54 | 25.98 | 9.56 |
| Margin: | -22.39 | 3.75 | 26.14 |
| Total Points: | 48.69 | 55.71 | -7.02 |