| 9/1/2012 | Juniata | 16 | at | Thiel (3-7) | 13 | at TPAC | ||
| 9/8/2012 | Dickinson (4-6,4-5) | 24 | at | Juniata | 17 | |||
| 9/15/2012 | Juniata | 7 | at | Gettysburg (7-3,6-3) | 28 | |||
| 9/22/2012 | Franklin & Marshall (7-4,6-3) | 45 | at | Juniata | 38 | |||
| 9/29/2012 | Juniata | 20 | at | Johns Hopkins (10-2,8-1) | 40 | |||
| 10/13/2012 | Ursinus (6-4,5-4) | 37 | at | Juniata | 27 | |||
| 10/20/2012 | Juniata | 14 | at | Muhlenberg (8-3,7-2) | 35 | |||
| 10/27/2012 | McDaniel (0-10,0-9) | 7 | at | Juniata | 24 | |||
| 11/3/2012 | Moravian (2-8,2-7) | 6 | at | Juniata | 14 | |||
| 11/10/2012 | Juniata | 0 | at | Susquehanna (6-4,5-4) | 21 |
| vs Juniata | vs Other Opponents | Juniata compared to OOs | |
| Record: | 7-3 | 46-48 | |
| Points Scored: | 25.60 | 24.28 | -1.32 |
| Points Allowed: | 17.70 | 24.23 | -6.53 |
| Margin: | 7.90 | 0.05 | -7.85 |
| Total Points: | 43.30 | 48.51 | -5.21 |