| 9/1/2012 | Morehouse (3-7) | 29 | at | Howard | 30 | SIAC (D2) | ||
| 9/8/2012 | Howard | 0 | at | Rutgers (9-4) | 26 | at BigE | ||
| 9/15/2012 | Howard | 37 | at | Norfolk State (4-7,2-6) | 36 | |||
| 9/29/2012 | Savannah State (1-10,0-8) | 9 | at | Howard | 56 | |||
| 10/6/2012 | Florida A&M (4-7,4-4) | 10 | at | Howard | 17 | |||
| 10/13/2012 | Howard | 10 | at | North Carolina A&T (7-4,5-3) | 38 | |||
| 10/20/2012 | Morgan State (4-7,3-5) | 21 | at | Howard | 20 | |||
| 10/27/2012 | Howard | 23 | at | South Carolina State (5-6,4-4) | 41 | |||
| 11/3/2012 | Hampton (3-7,3-5) | 10 | at | Howard | 20 | |||
| 11/10/2012 | Howard | 26 | at | Georgia Southern (10-4) | 69 | at SoCon | ||
| 11/17/2012 | Delaware State (6-5,5-3) | 34 | at | Howard | 41 |
| vs Howard | vs Other Opponents | Howard compared to OOs | |
| Record: | 5-6 | 51-62 | |
| Points Scored: | 29.36 | 22.03 | -7.33 |
| Points Allowed: | 25.45 | 24.95 | 0.50 |
| Margin: | 3.91 | -2.92 | -6.83 |
| Total Points: | 54.81 | 46.98 | 7.83 |