| 9/2/2006 | Southern Univ | 30 | vs | Bethune-Cookman | 29 | Jacksonville FL | |||
| 9/9/2006 | MS Valley St | 14 | @ | Southern Univ | 31 | SWAC | |||
| 9/16/2006 | Southern Univ | 23 | vs | Prairie View | 26 | OT | SWAC | Houston TX | |
| 9/23/2006 | North Carolina Central D2 | 27 | @ | Southern Univ | 20 | ||||
| 9/30/2006 | Alabama St | 20 | @ | Southern Univ | 38 | SWAC | |||
| 10/7/2006 | Southern Univ | 21 | @ | Alabama A&M | 28 | SWAC | |||
| 10/14/2006 | Southern Univ | 28 | @ | Jackson St | 31 | 2 OT | SWAC | ||
| 10/21/2006 | Southern Univ | 10 | @ | Alcorn St | 26 | SWAC | |||
| 11/4/2006 | Texas Southern | 17 | @ | Southern Univ | 34 | SWAC | |||
| 11/11/2006 | Ark Pine Bluff | 45 | @ | Southern Univ | 20 | SWAC | |||
| 11/25/2006 | Grambling | 17 | vs | Southern Univ | 21 | SWAC | New Orleans LA |