| 9/5/2013 | Emporia State | 43 | at | Fort Hays State (6-5,4-5) | 13 | | | |
| 9/12/2013 | Nebraska-Kearney (3-8,3-6) | 21 | at | Emporia State | 34 | | | |
| 9/21/2013 | Emporia State | 54 | at | Central Oklahoma (2-8,2-8) | 38 | | | |
| 9/28/2013 | Northeastern State (2-9,2-8) | 24 | at | Emporia State | 45 | | | |
| 10/5/2013 | Emporia State | 52 | at | Lincoln MO (3-8,2-8) | 14 | | | |
| 10/12/2013 | Southwest Baptist (1-10,1-9) | 17 | at | Emporia State | 63 | | | |
| 10/19/2013 | Emporia State | 52 | at | Lindenwood (3-6,2-6) | 21 | | | |
| 11/2/2013 | Emporia State | 35 | at | Missouri Western (8-3,7-3) | 30 | | | |
| 11/9/2013 | Northwest Missouri State (15-0,10-0) | 48 | at | Emporia State | 21 | | | |
| 11/16/2013 | Washburn (8-3,7-3) | 23 | at | Emporia State | 34 | | | |
| 11/23/2013 | Emporia State | 13 | at | Minnesota-Duluth (11-2) | 55 | | D2 Round 1 | at NSIC |