| 9/5/2013 | Kentucky State | 42 | at | Kentucky Wesleyan | 6 | vs SIAC | ||
| Chadron State | 40 | at | Missouri S&T | 34 | vs RMAC | |||
| Concordia NE | 30 | at | William Jewell | 15 | vs GPAC (NAIA) | |||
| 9/7/2013 | Ashland | 9 | at | Indianapolis | 10 | vs GLIAC | ||
| Tiffin | 28 | at | McKendree | 32 | vs GLIAC | |||
| Valparaiso | 31 | at | St Joseph's | 34 | vs PIO (1AA) | |||
| Southwest Baptist | 37 | at | Truman State | 40 | vs MAIAA | |||
| Quincy | 6 | at | Western Illinois | 34 | @ MVC (1AA) | |||
| 9/14/2013 | Truman State | 15 | at | Grand Valley State | 31 | @ GLIAC | ||
| McKendree | 14 | at | Henderson State | 75 | @ GAC | |||
| Quincy | 7 | at | Indiana State | 70 | @ MVC (1AA) | |||
| St Xavier | 20 | at | Indianapolis | 51 | vs MSFA (NAIA) | |||
| Lindsey Wilson | 39 | at | Kentucky Wesleyan | 20 | vs MSC (NAIA) | |||
| Missouri S&T | 3 | at | Missouri Western | 63 | @ MAIAA | |||
| Siena Heights | 35 | at | St Joseph's | 31 | vs MSFA (NAIA) | |||
| William Jewell | 36 | at | Valparaiso | 34 | @ PIO (1AA) | |||
| 9/21/2013 | St Joseph's | 45 | at | Alderson-Broaddus | 17 | @ D2IND | ||
| Indianapolis | 14 | at | Drake | 31 | @ PIO (1AA) | |||
| Kentucky Wesleyan | 29 | at | Lindenwood-Belleville | 49 | @ NAIAIND (NAIA) | |||
| Wisconsin-La Crosse | 14 | at | Missouri S&T | 27 | vs WIAC (D3) | |||
| Northwood | 42 | at | Quincy | 39 | vs GLIAC | |||
| William Penn | 23 | at | Truman State | 24 | vs MSFA (NAIA) | |||
| McKendree | 29 | at | William Jewell | 24 | ||||
| 9/28/2013 | Indianapolis | 17 | at | Hillsdale | 14 | @ GLIAC | ||
| Kentucky Wesleyan | 7 | at | Liberty | 73 | @ BIGS (1AA) | |||
| Missouri S&T | 10 | at | Lindenwood | 27 | @ MAIAA | |||
| Lindenwood-Belleville | 7 | at | Quincy | 36 | vs NAIAIND (NAIA) | |||
| Trine | 21 | at | St Joseph's | 24 | vs MIAA (D3) | |||
| Central Missouri | 44 | at | Truman State | 23 | vs MAIAA | |||
| South Dakota Tech | 70 | at | William Jewell | 48 | vs D2IND | |||
| 10/5/2013 | William Jewell | 17 | at | Fort Hays State | 34 | @ MAIAA | ||
| Missouri S&T | 3 | at | Indianapolis | 34 | ||||
| Findlay | 38 | at | McKendree | 21 | vs GLIAC | |||
| Truman State | 33 | at | Quincy | 0 | ||||
| Kentucky Wesleyan | 9 | at | St Joseph's | 35 | ||||
| 10/12/2013 | Missouri S&T | 41 | at | Kentucky Wesleyan | 21 | |||
| Indianapolis | 45 | at | McKendree | 7 | ||||
| St Joseph's | 34 | at | Quincy | 26 | ||||
| Truman State | 45 | at | William Jewell | 7 | ||||
| 10/19/2013 | Quincy | 80 | at | Kentucky Wesleyan | 26 | |||
| St Joseph's | 13 | at | Missouri S&T | 14 | ||||
| McKendree | 21 | at | Truman State | 28 | ||||
| Indianapolis | 56 | at | William Jewell | 3 | ||||
| 10/26/2013 | Kentucky Wesleyan | 0 | at | Indianapolis | 52 | |||
| William Jewell | 19 | at | Quincy | 17 | ||||
| McKendree | 13 | at | St Joseph's | 31 | ||||
| Missouri S&T | 7 | at | Truman State | 27 | ||||
| 11/2/2013 | Truman State | 35 | at | Kentucky Wesleyan | 27 | |||
| Quincy | 16 | at | McKendree | 51 | ||||
| Indianapolis | 27 | at | St Joseph's | 24 | ||||
| Missouri S&T | 24 | at | William Jewell | 6 | ||||
| 11/9/2013 | Quincy | 7 | at | Indianapolis | 33 | |||
| William Jewell | 37 | at | Kentucky Wesleyan | 17 | ||||
| McKendree | 21 | at | Missouri S&T | 31 | ||||
| St Joseph's | 6 | at | Truman State | 3 | ||||
| 11/16/2013 | Truman State | 14 | at | Indianapolis | 21 | |||
| Kentucky Wesleyan | 14 | at | McKendree | 58 | ||||
| Quincy | 3 | at | Missouri S&T | 20 | ||||
| William Jewell | 31 | at | St Joseph's | 37 | OT | |||
| 11/23/2013 | West Texas A&M | 27 | at | Indianapolis | 14 | D2 Round 1 | vs LSC |