| 9/6/2013 | Widener | 21 | at | Wesley | 33 | vs MIDAC | ||
| 9/7/2013 | Macalester | 31 | at | Crown | 14 | @ UMWAC | ||
| Maranatha Baptist | 56 | at | Martin Luther | 54 | @ UMWAC | |||
| Apprentice | 6 | at | Muhlenberg | 59 | @ CEN | |||
| Alfred State | 0 | at | Ohio Northern | 55 | @ OAC | |||
| Methodist | 33 | at | Southern Virginia | 20 | vs USASC | |||
| 9/14/2013 | Alfred State | 21 | at | Concordia MI | 35 | @ MSFA (NAIA) | ||
| Macalester | 10 | at | Concordia WI | 20 | @ NAC | |||
| Apprentice | 14 | at | Gallaudet | 38 | @ ECFC | |||
| Trinity Bible | 38 | at | Maranatha Baptist | 20 | vs NONE (Unk?) | |||
| Southern Virginia | 24 | at | North Carolina Wesleyan | 21 | OT | @ USASC | ||
| Salisbury | 27 | at | Wesley | 30 | vs E8 | |||
| 9/21/2013 | Greensboro | 34 | at | Apprentice | 21 | vs USASC | ||
| Alfred State | 0 | at | Husson | 13 | @ ECFC | |||
| Macalester | 30 | at | Maranatha Baptist | 6 | ||||
| Wesley | 7 | at | Mary Hardin-Baylor | 35 | @ ASWC | |||
| Virginia U-Lynchburg | 30 | vs | Southern Virginia | 33 | Roanoke VA | vs NONE (Unk?) | ||
| 9/28/2013 | Apprentice | 41 | at | Alfred State | 55 | |||
| Wesley | 46 | at | Birmingham-Southern | 12 | @ SAA | |||
| Southern Virginia | 2 | at | New Jersey | 7 | @ NJAC | |||
| 10/5/2013 | Maranatha Baptist | 41 | at | Aurora | 84 | @ NAC | ||
| Mayville State | 26 | at | Macalester | 18 | vs NSAA (NAIA) | |||
| Huntingdon AL | 28 | at | Wesley | 38 | vs USASC | |||
| 10/12/2013 | Carleton | 56 | at | Macalester | 17 | vs MIA | ||
| Concordia WI | 70 | at | Maranatha Baptist | 14 | vs NAC | |||
| Alfred State | 13 | at | Rochester | 38 | @ LL | |||
| Warner U. | 20 | at | Southern Virginia | 35 | vs NAIAIND (NAIA) | |||
| Virginia U-Lynchburg | 0 | at | Wesley | 40 | vs NONE (Unk?) | |||
| 10/19/2013 | Macalester | 7 | at | Chicago | 26 | @ UAA | ||
| Maranatha Baptist | 14 | at | Lakeland | 55 | @ NAC | |||
| Wesley | 17 | at | Rowan | 24 | @ NJAC | |||
| Apprentice | 7 | at | Southern Virginia | 34 | ||||
| 10/26/2013 | Edward Waters | 38 | at | Apprentice | 21 | vs NAIAIND (NAIA) | ||
| Washington U | 7 | at | Macalester | 0 | vs UAA | |||
| Rockford | 34 | at | Maranatha Baptist | 13 | vs NAC | |||
| Bluefield | 18 | at | Southern Virginia | 44 | vs MSC (NAIA) | |||
| Menlo | 13 | at | Wesley | 20 | vs NAIAIND (NAIA) | |||
| 11/2/2013 | Southern Virginia | 38 | at | Apprentice | 6 | |||
| Trinity Bible | 13 | at | Macalester | 44 | vs NONE (Unk?) | |||
| Maranatha Baptist | 6 | at | Wisconsin Lutheran | 56 | @ NAC | |||
| 11/9/2013 | Macalester | 16 | at | Augsburg | 34 | @ MIA | ||
| Ill. Benedictine | 55 | at | Maranatha Baptist | 13 | vs NAC | |||
| Alfred State | 0 | at | Southern Virginia | 30 | ||||
| Wesley | 35 | at | UNC-Charlotte | 28 | @ INDFCS (1AA) | |||
| Apprentice | 7 | at | Webber International | 46 | @ NAIAIND (NAIA) | |||
| 11/16/2013 | Ave Maria | 42 | at | Apprentice | 21 | vs NAIAIND (NAIA) | ||
| Maranatha Baptist | 22 | at | Concordia IL | 48 | @ NAC | |||
| Hamline | 0 | at | Macalester | 7 | vs MIA | |||
| Southwestern Texas | 0 | at | Southern Virginia | 40 | vs SCAC | |||
| Alfred State | 0 | at | Wesley | 47 | ||||
| 11/23/2013 | Wesley | 29 | at | Johns Hopkins | 24 | D3 Round 1 | @ CEN | |
| 11/30/2013 | Ithaca | 15 | at | Wesley | 23 | D3 Round 2 | vs E8 | |
| 12/7/2013 | Wesley | 59 | at | Mount Union | 62 | D3 Quarterfinals | @ OAC |