| 9/2/2006 | Winston-Salem St | 41 | @ | NC A&T | 14 | MEAC | |||
| 9/16/2006 | NC A&T | 14 | @ | Hampton | 48 | MEAC | |||
| 9/23/2006 | NC A&T | 7 | @ | UL Lafayette | 48 | ||||
| 9/30/2006 | NC A&T | 20 | @ | Norfolk St | 42 | MEAC | |||
| 10/7/2006 | Morgan St | 32 | @ | NC A&T | 0 | MEAC | |||
| 10/14/2006 | NC A&T | 21 | @ | Delaware St | 37 | MEAC | |||
| 10/21/2006 | Howard | 26 | @ | NC A&T | 0 | MEAC | |||
| 10/26/2006 | NC A&T | 7 | @ | Bethune-Cookman | 70 | MEAC | |||
| 11/4/2006 | Florida A&M | 45 | @ | NC A&T | 12 | MEAC | |||
| 11/11/2006 | Elon | 45 | @ | NC A&T | 0 | ||||
| 11/18/2006 | S Carolina St | 41 | @ | NC A&T | 19 | MEAC | Charlotte NC |